Ulrike Heberlein

BROMODEOXYURIDINE (BrdU or BUdR) INCORPORATION AND VISUALIZATION


BUdR; incorporation is a convenient technique for labelling cells undergoing DNA synthesis. At low concentrations it will not block cell division and will be incorporated into replicating DNA with little apparent damage.
bromodeoxyuridine;
Preparation of BUdR food and feeding: BrdU;
€ Make a BUdR stock solution by dissolving 10 mg of BUdR in 350µl of 50% ethanol (28.6 mg/ml) and store at -20°C (it forms a suspension; be sure to vortex before using an aliquot). BUdR is quite toxic; handle and dispose of responsibly.
€ For in vivo labelling weigh and melt some fly food (regular corn meal/agar food) in the microwave until just liquified. After letting the food cool a bit add the BUdR suspension in ethanol to a final concentration of 0.5 mg/ml. For short pulses (2-8 hrs) the concentration can be increased to 1.0 mg/ml. Return the BUdR-food into the vial and let solidify. In addition (optional) make up some yeast paste and add BUdR to 0.5 mg/ml final concentration. Put this paste on top of the corn meal/agar food.
€ Put larvae of the desired age onto this food. To look at eye discs I found that it is necessary to pull third instar larvae out of the food in their original vials or bottles. If larvae are already crawling up the walls they don't feed anymore, and obviously won't incorporate any BUdR.

BUdR visualization:

1) Dissect cephalic complexes in PBS and fix for 30 minutes at room temperature in Carnoy's fix; (60 ml ethanol + 10 ml glacial acetic acid + 30 ml chloroform).

2) Rehydrate by incubating for 3 minutes each in 70%, 50%, 30% ethanol in PBS-TX (1xPBS, 0.3% Triton X-100). Finish by incubation in PBS-TX for 5 minutes on ice.

3) Denature the DNA by incubating for 1 hr in 2N HCl/PBS-TX (1:1 mix of 4N HCl and PBS-TX). Wash twice, 5 minutes each, in PBS-TX on ice.

4) Incubate for 30 minutes in 10% goat serum in PBS-TX.

5) Incubate overnight at 4°C (I imagine that for eye-discs, in contrast to whole embryos or larval CNSs, a few hours is sufficient) in the primary antibody (1:200 dilution of monoclonal anti-BUdR from Becton-Dickinson).

6) Wash in PBS-TX on ice six times for 10 minutes each (again, this might be an exageration when staining eye discs).

7) Incubate at 4°C for several hours to overnight in a 1:200 dilution of biotinylated goat anti-mouse IgG (Vectastain;) in PBS-TX.

8) Wash in PBS-TX on ice six times for 10 minutes each.

9) Incubate for 30 minutes in Vectastain ABC reagent (10µl of reagent A + 10µl of reagent B + 980µl of PBS).

10) Wash in PBS on ice two times for 10 minutes each,

11) React with DAB/H2O2/CoCl2 (100µl 5mg/ml DAB + 900µl PBS + 1µl 3% H2O2 + 20µl 1% CoCl2) until stain becomes evident, usually a few minutes.

12) Dehydrate discs by a graded series of 30, 50, 70, 90, 100% ethanol.

13) Mount in DPX.